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TMM - Mapping Save Performance

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I am currently using TMM 2.1.6, to perform an auto-find mappings between a source and a target.  The application was able to automatically find 200+ mappings within a few seconds, but when I try to save those mappings, it is taking approximately 30+ minutes to complete.  Is there anyway for us to speed up the performance when the mappings are being saved? 
For reference, our TMM repository housed on a network database and we will be unable to convert that to a local database.

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